Eight years after the mysterious death of his father, Kaito Kuroba, a slightly mischievous but otherwise ordinary teenager, discovers a shocking secret: the Phantom Thief Kaito Kid—also known as "The Magician Under the Moonlight"—was none other than his own father. The former thief was murdered by a criminal organization seeking a mythical stone called the Pandora Gem, said to shed a tear with the passing of the Valley Comet that comes every ten thousand years. When the tear is consumed, the gem supposedly grants immortality. Vowing to bring those responsible for his father's death to justice, Kaito dons the Phantom Thief's disguise, stealing priceless jewels night after night to find the Pandora Gem before his enemies can use the power for themselves. [Written by MAL Rewrite]

It has been two and a half years since Naruto Uzumaki left Konohagakure, the Hidden Leaf Village, for intense training following events which fueled his desire to be stronger. Now Akatsuki, the mysterious organization of elite rogue ninja, is closing in on their grand plan which may threaten the safety of the entire shinobi world. Although Naruto is older and sinister events loom on the horizon, he has changed little in personality—still rambunctious and childish—though he is now far more confident and possesses an even greater determination to protect his friends and home. Come whatever may, Naruto will carry on with the fight for what is important to him, even at the expense of his own body, in the continuation of the saga about the boy who wishes to become Hokage. [Written by MAL Rewrite]

The isolationist Akane Clan, composed of an all-girls body mainly consisting of young kunoichi in training, has a code to which they all must adhere: "As men are dangerous beings, interacting with them is forbidden." Kunoichi Tsubaki, the leader of the Dog Squad, is an excellent trainee with a promising future, but she has started to experience a strange feeling in her heart... whenever the subject of boys is brought up.

In episode one, Ginrei's dress is stolen, only to be used to fool the enemy. The second episode deals with a giant robot made exactly in her image. Finally, the third episode concerns Tetsugyu and Ginrei investigating a lost research team in a "wild west" desert setting.