In the 24th century on the planet Aqua, three girls—Akari Mizunashi, Alice Carroll, and Aika S. Granzchesta—continue to work hard toward achieving their goal of becoming Prima Undines: professional tour guide gondoliers. Luckily, the girls have the guidance of the three best Prima Undines in Neo-Venezia—Alicia Florence, Athena Glory, and Akira E. Ferrari—who are known as the "Water Fairies" in honor of their skill. With their help, the young apprentices train hard and work to overcome any situations that they find themselves in. Aria The Origination follows the hardships and daily lives of these three young girls, who are doing their best to improve as tour gondoliers in Neo-Venezia, a terraformed replica of Venice.

Drift peacefully into Neo Venezia, a city on the planet Aqua (formerly known as Mars). By the 24th century, humans have found a way to colonize the previously uninhabitable planet. As futuristic as that sounds, Neo Venezia is still teeming with rustic beauty; gondolas on wide canals and waterways are the main mode of transportation. The city itself is a faithful replication of Manhome's (the planet formerly known as Earth) Venice. To make sure that residents and tourists alike get the most from Neo Venezia's many wonders, companies offering guided tours via gondola were formed, one of which is named Aria Company. This is the workplace of Akari Mizunashi, a free spirited teenager from Manhome who is now a novice Undine (the title given to tour guides). Join Akari as she becomes intimately acquainted with other Undine, tourists, Neo Venezia's residents, and even the city itself, learning many valuable life lessons along the way, such as the wonderful truth that there are such things as manmade miracles.

In the original storyline as aired in Japan, Dairugger XV was simply an exploration robot, as well as an intended peace-keeping force. The Earth is in a time of prosperity. The president of the Terran League (the "Galaxy Alliance" in Voltron) launches a mission to explore beyond the galaxy. After commencing its mission of exploration, the starship Rugger-Guard is attacked by a ship of the Galbeston Empire. Dairugger, the super robot, is deployed in order to defend the Earth. It is somewhat by fate that they must help the people of Galbeston find a new planet before it explodes, and liberate it from its despotic Emperor. In the Japanese version, it does not have anything to do with King of the Beasts GoLion, as opposed to the U.S. version, Voltron: Defender of the Universe. There are three assault team units: Land, Air, and Sea. There are a total of 15 parts referred to as "Rugger," which can combine together to form the super-robot Dairugger. The design of the 15 separate Rugger units came from the sport of rugby, since 15 players are required to form a rugby union. The U.S. version would rename the "Galbeston Empire" to "Drule Empire," along with editing a fair amount of violence and sexual content to keep the show safe for general audience broadcast.

A criminal group known as Demon Seed terrorizes Tokyo with its vast armies of mecha. The local police is afraid to confront them, but one person stands in their way: Maron Namikaze, a 13-year-old idol singer with a catchy voice and unbelievable superhuman strength.