The alien Wulgaru's last assault against humanity was foiled by the heroic actions of the genetically enhanced humans known as the Evolved Children in their advanced AHSMB battle armor, but now a new attack has been launched against Earth under an even deadlier champion, Diorna, created from the fusion of DNA from two Wulgaru Royals. Unfortunately, Izuru Hitachi, the leader of Team Rabbits who defeated the Wulgaru Royal Jiart, is still out of action and recovering, so the task of marshalling the Majestic Princes and stopping Diorna falls upon the unready shoulders of Toshikazu Asagi. Together with the remaining members of Team Rabbits and the recently created Team Fawn, it’s up to Asagi to hold the line against the most ruthless adversary yet.

Ayato Kamina was separated from the girl he loved, Haruka Mishima, when an event occurred that was thought to have killed everyone outside of Tokyo. But one day three years later, invaders suddenly attacked the city. It was then that he meets an agent of TERRA, Haruka Shitow, who tells him that she will give him the truth about the world. It is the beginning of a series of strange events, which involve him activating a giant mecha, the RahXephon and finding out that many people, including his own mother, has blue blood, and that he was actually living in a self-encased dimension where time moves slower than that of the outside world.

Somewhat based on the real story of how Gainax was founded, Otaku no Video addresses all aspects of an otaku lifestyle. Ken Kubo is a young man living an average life until he is dragged into a group of otaku. Slowly, he becomes more like them until he decides to abandon his former life to become king of otaku—the otaking! Mixed in are live-action interviews with real otaku, addressing every aspect of hardcore otaku life. Not only are anime and manga fans included, but also sci-fi fans, military fans, and other groups of Japanese geeks.

Mayfly reveals Cima's backstory in flashbacks as she reflects on her past prior to the events of Episode 13. It reveals that Cima and her unit poisoned a Side 5 colony using G-3 nerve gas, under orders, but were treated as pariahs afterwards by their own countrymen for committing such an atrocity. At the end of the war her superior refused to let her retreat to Axis. Because their home colony Mahal had been converted into a weapon, Cima and her men were left stranded and homeless.